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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.008G071200.1.p |
Common Name | Sb08g006300, SORBIDRAFT_08g006300 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ARR-B |
Protein Properties |
Length: 552aa MW: 60852.2 Da PI: 5.903 |
Description |
ARR-B family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.008G071200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 83.9 | 1.7e-26 | 192 | 245 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k+r++W +LH++Fveav+q+ G+++A Pk+il +m+v+gLt+e+v+SHLQkYR+
Sobic.008G071200.1.p 192 KQRVQWCGQLHQKFVEAVSQI-GIDRAAPKKILAIMNVEGLTRENVASHLQKYRI 245
79*******************.********************************7 PP
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2 | Response_reg | 77.6 | 4.4e-26 | 12 | 121 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH....ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHH CS
Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd....pDlillDiempgmdGlellkeireeepklpiivvtahgeeed 85
vl vdD+++ +++l++ l+ +y ++++++d++ al++l+e++ +Dl++ D+ mp+mdG++ll+ i e +lp+i+++a++e ++
Sobic.008G071200.1.p 12 VLAVDDDRVCLKILERQLKYCNY-NATVVSDARTALDMLRERKegnqFDLVISDVIMPNMDGFKLLELIGLEM-DLPVIMLSANSETQT 98
799********************.***************99989999**********************6644.8************** PP
HHHHHHTTESEEEESS--HHHHH CS
Response_reg 86 alealkaGakdflsKpfdpeelv 108
+ + +k Ga d+ +Kp+ e+l+
Sobic.008G071200.1.p 99 IMKGIKHGACDYMVKPVRLEQLR 121
********************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 552 aa
Download sequence Send
to blast |
MDADTFPAGL RVLAVDDDRV CLKILERQLK YCNYNATVVS DARTALDMLR ERKEGNQFDL 60 VISDVIMPNM DGFKLLELIG LEMDLPVIML SANSETQTIM KGIKHGACDY MVKPVRLEQL 120 RGIWTHVVKN SMNDPQNNIN SGSDDDVQKL RYGNGDKGMK DGANHRNKYS KKNKKVVDVA 180 DEDSENTSAQ KKQRVQWCGQ LHQKFVEAVS QIGIDRAAPK KILAIMNVEG LTRENVASHL 240 QKYRIYLRKL GDGKLRNSNP FADETEALRG NMYGPTFIGS PRSRNHSLPR SCSSYASILR 300 GKILGSSRGI PYEDIANGDI LAPSGHLPLQ SPELVKQPSV QLQSCSAGQF NEVAREVHQF 360 AGPSNSWKAD VPSRFSDLGH DVGKPEDPTQ DNIFKINQLS RLAHSSGQVP TFGNEYQKKI 420 TGIMGKDVPV EQVAPFSFGN NTHSTLTPNG NSALAISSST RPDLQIDNSA MLTQVLNGGG 480 ASDNHHDGST INHQAVSDQL NNINEFLMGT SEAQNVESDD LDDFLASLVN QDFINNDDSL 540 IDRDWEFAPL L*
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