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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.008G028800.1.p |
Common Name | Sb08g002540, SORBIDRAFT_08g002540 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 236aa MW: 26587.7 Da PI: 4.8967 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.008G028800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 26.1 | 1.7e-08 | 106 | 152 | 21 | 59 |
-EEEEEE-ST...T---EEEEEE-SSSTT.....EEEEEEES--SS- CS
WRKY 21 prsYYrCtsa...gCpvkkkversaedpk.....vveitYegeHnhe 59
rsYYrC+ + gC ++k v+++++d++ ++++ Y g+H ++
Sobic.008G028800.1.p 106 RRSYYRCANSkdqGCLATKTVQQKESDGSagtvrLFDVDYYGQHICK 152
69*****9988889***********9986222226889999999886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MSILESSTVG GCQVVINEIE HQRALMRELH DLILPLLDPC SRQEKLAQQL FQDISNSSSK 60 VISFLKLGDN SKKQANLIKY RRKGGKNNEV DSHMLGEEAK EIGNRRRSYY RCANSKDQGC 120 LATKTVQQKE SDGSAGTVRL FDVDYYGQHI CKTDDIIHPY VVETTHYTAP IANHNESSSG 180 STVVHNDVHE IQDESFGNLF MMPSIEEYWT DFTDTEMAGT LDEVTSLMIF EDIWS*
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