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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.007G223200.2.p |
Common Name | Dof22 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
Dof |
Protein Properties |
Length: 266aa MW: 27579.6 Da PI: 6.1323 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.007G223200.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 119.8 | 1e-37 | 50 | 106 | 6 | 62 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+cprC s++tkfCyynny++sqPr+fCk+CrryWtkGG+lrnvPvGgg+rk+ +ss
Sobic.007G223200.2.p 50 DPCPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRKKPSSS 106
68**************************************************98876 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MQEVSVEPGR RPAQQPHHQF AGVDLRRPKG YATAPVQEAT PAVKVAEGGD PCPRCASRDT 60 KFCYYNNYNT SQPRHFCKGC RRYWTKGGTL RNVPVGGGTR KKPSSSSYAA AAAAAADADN 120 KPPKKKPASK KRRVEAPVPE PAAAADASGV TDTVAAADSA KTTTTTTTTT TDGASEITTE 180 TEAAVAVAVP VAEEDSESLA HLLLQPGAEE AVSLGLGLSD FPSAAGKAVL DDDSFVWPAA 240 FDLGTCWASA GFADTDPASL FLNLP*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in all tissues examined. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence at the MNF1-binding site. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KC582415 | 0.0 | KC582415.1 Sorghum bicolor dof22 protein (dof22) gene, complete cds. |