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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.007G155900.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 365aa MW: 37900.7 Da PI: 6.9241 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.007G155900.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 48.6 | 1.8e-15 | 286 | 338 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
+r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++N++L+k+ ee+ ++ +
Sobic.007G155900.3.p 286 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKEQNEELQKKQEEIMEMQK 338
79*******************************************99999865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
GO:0010255 | Biological Process | glucose mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 365 aa
Download sequence Send
to blast |
MDPKDGERMG AAGPGPLSRQ GSIYSLTFDE FQNTLGGMGG GLGKDFGSMN MDELLRSIWT 60 AEESQAIASA SASASASAAG AGAGPVGDGG AALQRQGSLT LPRTLSVKTV DEVWRDFARE 120 GPPGPTAGGA EPQPNRQPTL GEMTLEEFLV RAGVVRDNPA AAAAAAAAAV SAQPVAPRPI 180 QAVNNGASIF FGNFGGANDA GAGAMGFAPV GIGDQAMGNG LMPGVAGMAG GAVTVVSPVD 240 TSVAQLDSMG KGNGDLSSPM APVPYPFEGV IRGRRSGAGV EKVVERRQRR MIKNRESAAR 300 SRARKQAYTM ELEAEVQKLK EQNEELQKKQ EEIMEMQKNQ VLEVISNPYA QKKRCLRRTL 360 TGPW*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaves and embryos. {ECO:0000269|PubMed:10611387}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT039652 | 0.0 | BT039652.1 Zea mays full-length cDNA clone ZM_BFc0037E11 mRNA, complete cds. |
GenBank | EU964768 | 0.0 | EU964768.1 Zea mays clone 281458 bZIP transcription factor ABI5 mRNA, complete cds. |
Publications
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- Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell, 2002. 14(12): p. 3177-89 [PMID:12468735] - Kobayashi Y, et al.
Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors. Plant J., 2005. 44(6): p. 939-49 [PMID:16359387] - Kobayashi F,Maeta E,Terashima A,Takumi S
Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiol Plant, 2008. 134(1): p. 74-86 [PMID:18433415]
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