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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.007G118301.1.p |
Common Name | Sb07g019400, SORBIDRAFT_07g019400 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 341aa MW: 35622.7 Da PI: 6.9795 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.007G118301.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 86.1 | 3.1e-27 | 131 | 191 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
dDg++WrKYGqK++ g+++pr+YYrCt++ +Cp++k+v+r+++ p +++++Y+geH+++
Sobic.007G118301.1.p 131 DDGHSWRKYGQKDILGAKHPRAYYRCTHRnsqNCPATKQVQRADDHPALFDVVYHGEHTCR 191
8***************************98999**************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MADAVESGGR ALLVSELGRV QDLVRQLEQQ LRAPADAASV DLCRRLVHQI VALTDHSIGM 60 LRASPADLAP SPPLSATGSP ISGGDATSDH HHHHPFRAAG ASPKKRKATA RWTSQQVRVS 120 AAGGGAEGPA DDGHSWRKYG QKDILGAKHP RAYYRCTHRN SQNCPATKQV QRADDHPALF 180 DVVYHGEHTC RPPAAAGGSG GAKRAQQQQH NPHAQAALQG LAARLTVATT TAAAAAAAAA 240 ALPPMTPESC PVRGASSPWS PVGSDSNGCL QHQGVSPCPV PGYGDWAPEG DLQEVVSSAF 300 AAVSSAAPLP VLDDEFMSLE CFAFDHNFDI DTAMPSLYYP *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ726907 | 0.0 | KJ726907.1 Zea mays clone pUT3452 WRKY transcription factor (WRKY25) mRNA, partial cds. |