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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sobic.006G236600.1.p |
| Common Name | Sb06g030340, SORBIDRAFT_06g030340 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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| Family |
bHLH |
| Protein Properties |
Length: 105aa MW: 11180.4 Da PI: 8.5371 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sobic.006G236600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 21.1 | 5.6e-07 | 30 | 71 | 14 | 54 |
HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
d+i + +++L+ llP+ ++++++ + s a +L+ ++ YI+sL
Sobic.006G236600.1.p 30 DQISELLSKLQALLPEsQTRNGAHRGSAARVLQDTCSYIRSL 71
6899************777999999***************99 PP
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in leaf blades, leaf sheaths, lamina joint, stems and panicles. Expressed at low levels in roots. {ECO:0000269|PubMed:20009022}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination (By similarity). {ECO:0000250}. |
| UniProt | Atypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination. {ECO:0000269|PubMed:20009022}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By epibrassinolide. {ECO:0000269|PubMed:20009022}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | FP096598 | 4e-98 | FP096598.1 Phyllostachys edulis cDNA clone: bphyst010g20, full insert sequence. |
