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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.006G133700.1.p |
Common Name | Sb06g021350, SORBIDRAFT_06g021350 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 379aa MW: 39813.1 Da PI: 6.0486 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.006G133700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.8 | 1.5e-10 | 187 | 245 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l +l+ l+se+
Sobic.006G133700.1.p 187 KRAKRILANRQSAARSKERKMRYIAELERKVQNLQSEATTLSAQLAMLQRDTTGLTSEN 245
9***********************************************99999888887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 379 aa
Download sequence Send
to blast |
MDQASPADPA ASCSASASPS PSASAAASAA ASASGDVAAM LPDSPPRRGA GHRRAQSEIL 60 LGGAALPDDL TFDADLGVVG EACVAGDEDE EDEDEDEEGG GGGAGGSRMF EMFLENGGTL 120 AGPSAHPHPA ATATPPPRPR HQHSMSMDGS TSLLGSAAAG TPGRAGADAK KAISDAKLAE 180 LALVDPKRAK RILANRQSAA RSKERKMRYI AELERKVQNL QSEATTLSAQ LAMLQRDTTG 240 LTSENSDLKV RVQTMEQQVR LQDALNDRLR DEIQQLKVAT GQVNANIGKM GNFSMSSFGG 300 NPQSYQRSHI QSLLAAQQLQ QLQIHSQHQQ QQTHLQQQHQ LLQEAHPFPV DLKMRGFAMS 360 SHAQNAGASD SHAVKSEP*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed constitutively at a low level in young seedlings and in roots, stems and leaves of mature plants. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor with an activatory role. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT066468 | 0.0 | BT066468.1 Zea mays full-length cDNA clone ZM_BFb0003G23 mRNA, complete cds. |