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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.005G046100.1.p |
Common Name | Sb05g003810, SORBIDRAFT_05g003810 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 341aa MW: 36571.5 Da PI: 6.516 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.005G046100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 33 | 1.3e-10 | 181 | 239 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr++r NR +A rs +RK +++ eLe+kv++L++e ++L +l l+ + l++e+
Sobic.005G046100.1.p 181 KRAKRILANRQSAARSKERKIKYTSELERKVQTLQTEATTLSAQLTLLQRDTSGLTTEN 239
9**********************************************999888888776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MDPRFPPPAP SSCFGGGGGL LPARGHHRRA HSETFIRLPD DDLLLDADAD FGFSDIDFPS 60 LSDDSPAASD PTPQPQPQAP PPQQPMPQQQ AASSAPPRPP SGAHMRSLSL DAAFFDSLSL 120 QGGGGGGGGG GVVGHKRSGS MDGSSSSFEG ESAPSSSVFP DYAKKAVPDD KLAELALLDP 180 KRAKRILANR QSAARSKERK IKYTSELERK VQTLQTEATT LSAQLTLLQR DTSGLTTENR 240 ELKLRLQAME EQAKLRDALN DALREEVQRL KIAVGQVPNM NGNPFNGGLP QQQQMPSYFS 300 QQQQMQYFGS HQGQHHNPNH HPQNSSNGGG QSLSDSMDFM *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT041487 | 0.0 | BT041487.1 Zea mays full-length cDNA clone ZM_BFc0033F19 mRNA, complete cds. |