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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.005G041100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 428aa MW: 44735.9 Da PI: 7.5669 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.005G041100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.3 | 9e-10 | 137 | 199 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
eke kr rr NRe+Ar +R++a +eL++kv+ L+++N+ +kke ++ +e+ +lk +
Sobic.005G041100.1.p 137 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLSSQNENMKKEKDMVMQEYLSLKEAN 199
89**********************************************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 428 aa
Download sequence Send
to blast |
MSDDSDGQRQ CRRGVTVDVD VELDAAMALA DMAGVGPAGE QQQQPPPPPV RRAPPPPGPA 60 NPTQDDEEEL ASTRLSLELG KVGIQASPCS SSSSAGGGGQ HPHHQQAAYH QQQQPAPATA 120 TATGYGPRPR HALTEAEKEA KRLRRVLANR ESARQTILRR QAIRDELARK VADLSSQNEN 180 MKKEKDMVMQ EYLSLKEANK QLKEQVATRT AKKAAAAVTA AMPAQQQQQA ESMAAVASTA 240 SPPATPPRPG FLYTAAAPAP VVPVPYVWGS WPPGATAAGY EHRGSPPPLC LQPCAWYYPV 300 VQADPRGSPS SAYAQPQPPQ QAAAFQDPRG AAAEPVGSGG SPAGGGATAE EDTDDDPCSL 360 TLGLDVVDKR MSAPVSIFPA GPGGGGGGAL SDRDKAATAA EARKRRKELT KLKHMHAATA 420 RPGGEQW*
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