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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.005G013500.1.p |
Common Name | Sb05g001170, SORBIDRAFT_05g001170 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 362aa MW: 38959.9 Da PI: 6.7669 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.005G013500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 69.8 | 4e-22 | 132 | 194 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SS..STTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversae..dpkvveitYegeHnhe 59
dDgy+WrKYG K+++g+ f+rsY+rCt++ gC ++k+v++ ++ d ++++tY+++H+++
Sobic.005G013500.1.p 132 DDGYEWRKYGEKKINGTLFTRSYFRCTYKddaGCLATKHVQQRDDnsDLPMFHVTYNNDHTCN 194
8***************************99999********9875115679**********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MACVGEREAA VREVAQVYEL IKLQQPLLLL HSPQHPPPPS TAKLAQSLLA KALRALNVAL 60 SVMKQQQPVV VVKAEPHQLS PPSPASANSQ VAIVPSTATR GAKRRRSSVA IMEGKKKTSS 120 SSWATVTAVP YDDGYEWRKY GEKKINGTLF TRSYFRCTYK DDAGCLATKH VQQRDDNSDL 180 PMFHVTYNND HTCNRAKAAG IANNGSSSNN LAALLAGCCS NGSGSGSGKG LTTMTTTNAR 240 PTEHAAAAAA MNMMKQEPPL LLPALIDLQQ PSACFPNEQI PQCQKEPLFP TSMEQQFVCG 300 ALRDHDSPVD GDIPSATGSC NSGETSWWDG YSGDMAAQMA AEDDPLHDLD RFLQCDSFMD 360 Y*
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