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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.005G013400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 335aa MW: 36498.3 Da PI: 5.9871 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.005G013400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 72.1 | 7.7e-23 | 135 | 197 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59
dDgy+WrKYG K+++g+ f+rsY+rCt++ gC ++k+v++ + +dp ++++tY+++H+++
Sobic.005G013400.1.p 135 DDGYEWRKYGEKKINGTLFTRSYFRCTYKddaGCLATKHVQQMDnnSDPPMFHVTYNNDHTCN 197
8***************************99999********965226999***********97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MACVADREDA VREVTQVYEL IKLQQPLLLL HSPQHPPPPP STTCQLAQSL LAKALRALNV 60 ALSVMKQQPA PVTPISVIKA EPHQLSPPCS LASAESQAAI VLSTATRGAK RRRSTEGKKK 120 NTSSSWATVT AVPYDDGYEW RKYGEKKING TLFTRSYFRC TYKDDAGCLA TKHVQQMDNN 180 SDPPMFHVTY NNDHTCNTSA RANTGSSSNL AALLAGCCNM KQEPTGHAAA AAAATMDMKQ 240 EVQEPPLLLP ALVDLQPSAC FHHEQIPRCQ EPLFPVSMEQ QFVCGPFRDD DSEIPSATGS 300 CISGETSWDG YSGHMAAAED DPLLDLERFL FMDY*
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