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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.004G359200.1.p |
Common Name | Sb04g038600, SORBIDRAFT_04g038600 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 179aa MW: 19163.5 Da PI: 9.3088 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.004G359200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 46.4 | 8.5e-15 | 103 | 160 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
++ +r++kNRe+A rsR+RK+a+++eLe++v L +eN +Lk + ++lk +a+l ++
Sobic.004G359200.1.p 103 RKNIRMMKNRESALRSRARKRAYVQELEKEVRRLVNENLKLKRQCKQLKVDMAALIQQ 160
6889**************************************9999999999888776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 179 aa
Download sequence Send
to blast |
MPRSPQLSLS GCSSLFSLSS TSTSRDNDDS AAALTAPVPA PPAGASLHPL PPRRLPILSL 60 SVGGEEENED EEEYLLGAGA LDLQLTGAGG GSNSSGGGCD EERKNIRMMK NRESALRSRA 120 RKRAYVQELE KEVRRLVNEN LKLKRQCKQL KVDMAALIQQ SSSKSSSHIR RTSSSTQL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU956324 | 1e-158 | EU956324.1 Zea mays clone 1560828 bZIP transcription factor mRNA, complete cds. |