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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.004G168800.1.p |
Common Name | Sb04g022020, SORBIDRAFT_04g022020 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 324aa MW: 34942 Da PI: 6.3615 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.004G168800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 24.6 | 5.4e-08 | 189 | 238 | 14 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
R + +rsR RK+++i+eLe+ v++L++ +L+ ++++l ++ ++l +e+
Sobic.004G168800.1.p 189 RRSGQRSRVRKLQYIAELERTVDSLQNMGADLAVRVSSLFQLHSALSMEN 238
67889**********************************99999999887 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MSRSPHLPPR CPPLGPQITR RDDSMFTQSC RFPSGDPFFG EPPCWLDDLL ADSGKAPKLP 60 PLRRACSDSD AILDALSTFQ SPIYPIEEGD LNSGGEGEDL LDAGEGGESG SVVEACCVYG 120 PNSPRQKSRL TSSESSMVNA VLENVPSNPL QYLTIDASSG VNGNVASGTA DASDAFGFGH 180 PDQDKSFKRR SGQRSRVRKL QYIAELERTV DSLQNMGADL AVRVSSLFQL HSALSMENKQ 240 LRMQISSLQH AKLIKDGQTQ ALKNEAERLK QMSARHRRSR SVTSCYDPTS FGADASAVNW 300 QMPDMGRLSL NGSSVSPRGG YGL*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT068415 | 0.0 | BT068415.1 Zea mays full-length cDNA clone ZM_BFb0176P14 mRNA, complete cds. |