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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.004G077500.1.p |
Common Name | Sb04g006400, SORBIDRAFT_04g006400 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 302aa MW: 32546.1 Da PI: 4.7718 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.004G077500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30 | 1.1e-09 | 130 | 175 | 4 | 49 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
+++ r ++NR +A +sR++Kk +++ Le k+k Leae +L l
Sobic.004G077500.1.p 130 SQKKWRQMRNRDSAMKSREKKKLYVKDLEIKSKYLEAECCRLSYAL 175
67889*********************************88877555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MAAAGIGAGG GEDHDLPLEE VDAVLASFSG DPAAAFAPLP APEAAASREP VVVAGESLRE 60 GLGDVEKFLM QDYEDEAPLD GVDEFLNGIL VGDSEGEGSP KLTGEKSADR ACAGEDEVVV 120 GVDCGDDSNS QKKWRQMRNR DSAMKSREKK KLYVKDLEIK SKYLEAECCR LSYALQCCTA 180 ENMVLRQSLL KDRHAGAPTA MQESAELSET LPLVSLLWLV SILCLFLVDD MPNRSLVAPR 240 SLERDLVKLA RTSINGVKMT RMTNNSDNPG ALGLIRLGRR CRGTRARIKS PWVPWHAVAA 300 C*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}. |