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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.004G074700.1.p |
Common Name | Sb04g006180, SORBIDRAFT_04g006180 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 178aa MW: 19225.5 Da PI: 6.516 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.004G074700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 41.8 | 2.4e-13 | 80 | 126 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
++ rr+++NRe+ArrsR RK+ +++eL v+eL + N++L el++
Sobic.004G074700.1.p 80 RKKRRLASNRESARRSRVRKQRRLDELSLQVAELLGTNHRLLVELNH 126
7899**************************************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 178 aa
Download sequence Send
to blast |
MQQNCAANLA CLPGFDLASL FLPQIQNDPI YDFSSFDMVD LDPYPYTYSC NGSVATTVSS 60 VSAAAAAADD HQERRGNDER KKRRLASNRE SARRSRVRKQ RRLDELSLQV AELLGTNHRL 120 LVELNHVIAK HAAVVRENAK LRDEAAGLQR KLSEMEVGGV GEAEAGAGAG AGTPEMA*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 92 | 98 | RRSRVRK |
2 | 92 | 99 | RRSRVRKQ |