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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G368300.1.p |
Common Name | Sb03g040970, SORBIDRAFT_03g040970 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 263aa MW: 27793.4 Da PI: 9.8947 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G368300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 46.1 | 1.1e-14 | 180 | 229 | 3 | 52 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52
+ +r++r++kNRe+A rsR+RK+a+i+eLe v +Le+eN +L e ee
Sobic.003G368300.1.p 180 AMQRQKRMIKNRESAARSRERKQAYIAELESLVTQLEEENAELLREQEER 229
689*************************************9987766543 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MASSRVMPSS SPSHTASDLA RLAQAASRPG GGGGGSGLGS MNVEELLRGI YGEMPTPAPP 60 ASEPERPMSP APAPEIATRK TAEQVWKEIT GGGATGEAVA PVAAQAAVPA GAGGATGGPE 120 MTLEDFLARE GAVKDDEVRI SGPSAPVMGF LGGTEGVGVP GGGGGRGRKR QLMDPVDRAA 180 MQRQKRMIKN RESAARSRER KQAYIAELES LVTQLEEENA ELLREQEERH QKRLKELLER 240 VTPVILRKKP SRDLRRTNSM QW*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to the ABA-responsive elements (ABREs) in vitro. Involved in abiotic stress responses and abscisic acid (ABA) signaling (PubMed:20039193). Involved in the signaling pathway that induces growth inhibition in response to D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by anoxia, drought, salt stress, oxidative stress, cold and abscisic acid (ABA) (PubMed:20039193). Induced by D-allose (PubMed:23397192). {ECO:0000269|PubMed:20039193, ECO:0000269|PubMed:23397192}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT054149 | 0.0 | BT054149.1 Zea mays full-length cDNA clone ZM_BFb0134E03 mRNA, complete cds. |