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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G363600.8.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 414aa MW: 45742.8 Da PI: 7.3873 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G363600.8.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35.3 | 2.5e-11 | 103 | 132 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33
k err+++NReAAr+sR+RKka++++Le+
Sobic.003G363600.8.p 103 AKTERRLAQNREAARKSRLRKKAYVQQLET 132
799*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 414 aa
Download sequence Send
to blast |
MLLLQGWDFQ PAAAAAAYFG FGELEEALIH GGGGAGNAHG VDPGVIIKND VAQAKSAAAA 60 GYLAGAGRPP TLEIFPSWPM RHQQQLHSRK HGSTRKDGKL VDAKTERRLA QNREAARKSR 120 LRKKAYVQQL ETSRIRLQQV EHELQRARSQ GLFVGGCSAA GDMSSGAAMF DMEYARWLDD 180 DSKRLAELRA GLQAQLLDGN LGLIVEECMQ HYDELFQLKA ALARSDVFHL LTGAWATAAE 240 RCFFWMGGFR PSELLKILIP QLDPLTEQQL LGICNLQQSS EQAEEALAQG LHQLHQSLAD 300 TVATGTLNDG AATPNYMNIM AVAIDKLACL ENFYQQADNL RQQTLHQMRR ILTTRQAARC 360 FLSIGEYYSR LRALSNLWAS RPRDNFIGTE SLSPTATELQ ALHHQQQNQF TGF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expression in meristem/developing ligule regions. {ECO:0000269|PubMed:9490265}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |