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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G363600.7.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 486aa MW: 52794.4 Da PI: 6.3023 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G363600.7.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 37.5 | 5.3e-12 | 174 | 204 | 3 | 33 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33
+k err+++NReAAr+sR+RKka++++Le+
Sobic.003G363600.7.p 174 HDKTERRLAQNREAARKSRLRKKAYVQQLET 204
589**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 486 aa
Download sequence Send
to blast |
MLLLQGWDFQ PAAAAAAYFG FGELEEALIH GGGGAGNAHG VDPGVIIKND VAQAKSAAAA 60 GYLAGAGRPP TLEIFPSWPM RHQQQLHSGN SQSVGSTTDS SSAQNTMSQM ELVSPASSAP 120 RQEVMMVTTD DYSYKPGLAA APAAAAAPPP SFQQHHPLPL QLHGGDGGGG GGDHDKTERR 180 LAQNREAARK SRLRKKAYVQ QLETSRIRLQ QVEHELQRAR SQGLFVGGCS AAGDMSSGAA 240 MFDMEYARWL DDDSKRLAEL RAGLQAQLLD GNLGLIVEEC MQHYDELFQL KAALARSDVF 300 HLLTGAWATA AERCFFWMGG FRPSELLKIL IPQLDPLTEQ QLLGICNLQQ SSEQAEEALA 360 QGLHQLHQSL ADTVATGTLN DGAATPNYMN IMAVAIDKLA CLENFYQQAD NLRQQTLHQM 420 RRILTTRQAA RCFLSIGEYY SRLRALSNLW ASRPRDNFIG TESLSPTATE LQALHHQQQN 480 QFTGF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expression in meristem/developing ligule regions. {ECO:0000269|PubMed:9490265}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |