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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G363600.6.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 502aa MW: 54572.4 Da PI: 6.7592 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G363600.6.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35 | 3.2e-11 | 191 | 220 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33
k err+++NReAAr+sR+RKka++++Le+
Sobic.003G363600.6.p 191 AKTERRLAQNREAARKSRLRKKAYVQQLET 220
799*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 502 aa
Download sequence Send
to blast |
MLLLQGWDFQ PAAAAAAYFG FGELEEALIH GGGGAGNAHG VDPGVIIKND VAQAKSAAAA 60 GYLAGAGRPP TLEIFPSWPM RHQQQLHSGN SQSVGSTTDS SSAQNTMSQM ELVSPASSAP 120 RQEVMMVTTD DYSYKPGLAA APAAAAAPPP SFQQHHPLPL QLHGGDGGGG GGDHDKRKHG 180 STRKDGKLVD AKTERRLAQN REAARKSRLR KKAYVQQLET SRIRLQQVEH ELQRARSQGL 240 FVGGCSAAGD MSSGAAMFDM EYARWLDDDS KRLAELRAGL QAQLLDGNLG LIVEECMQHY 300 DELFQLKAAL ARSDVFHLLT GAWATAAERC FFWMGGFRPS ELLKILIPQL DPLTEQQLLG 360 ICNLQQSSEQ AEEALAQGLH QLHQSLADTV ATGTLNDGAA TPNYMNIMAV AIDKLACLEN 420 FYQQADNLRQ QTLHQMRRIL TTRQAARCFL SIGEYYSRLR ALSNLWASRP RDNFIGTESL 480 SPTATELQAL HHQQQNQFTG F*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expression in meristem/developing ligule regions. {ECO:0000269|PubMed:9490265}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |