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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G363600.5.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 507aa MW: 54925.8 Da PI: 6.8612 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G363600.5.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.9 | 3.2e-11 | 196 | 225 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33
k err+++NReAAr+sR+RKka++++Le+
Sobic.003G363600.5.p 196 AKTERRLAQNREAARKSRLRKKAYVQQLET 225
799*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 507 aa
Download sequence Send
to blast |
MGSVCANCLG CRDFQPAAAA AAYFGFGELE EALIHGGGGA GNAHGVDPGV IIKNDVAQAK 60 SAAAAGYLAG AGRPPTLEIF PSWPMRHQQQ LHSGNSQSVG STTDSSSAQN TMSQMELVSP 120 ASSAPRQEVM MVTTDDYSYK PGLAAAPAAA AAPPPSFQQH HPLPLQLHGG DGGGGGGDHD 180 KRKHGSTRKD GKLVDAKTER RLAQNREAAR KSRLRKKAYV QQLETSRIRL QQVEHELQRA 240 RSQGLFVGGC SAAGDMSSGA AMFDMEYARW LDDDSKRLAE LRAGLQAQLL DGNLGLIVEE 300 CMQHYDELFQ LKAALARSDV FHLLTGAWAT AAERCFFWMG GFRPSELLKI LIPQLDPLTE 360 QQLLGICNLQ QSSEQAEEAL AQGLHQLHQS LADTVATGTL NDGAATPNYM NIMAVAIDKL 420 ACLENFYQQA DNLRQQTLHQ MRRILTTRQA ARCFLSIGEY YSRLRALSNL WASRPRDNFI 480 GTESLSPTAT ELQALHHQQQ NQFTGF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expression in meristem/developing ligule regions. {ECO:0000269|PubMed:9490265}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |