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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G363600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 534aa MW: 57914.1 Da PI: 6.7309 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G363600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.8 | 3.5e-11 | 223 | 252 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33
k err+++NReAAr+sR+RKka++++Le+
Sobic.003G363600.1.p 223 AKTERRLAQNREAARKSRLRKKAYVQQLET 252
799*************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 534 aa
Download sequence Send
to blast |
MVHGEESSWR MERAALPLNQ AFAYGAQAHA AAAPPTCFLD FQPAAAAAAY FGFGELEEAL 60 IHGGGGAGNA HGVDPGVIIK NDVAQAKSAA AAGYLAGAGR PPTLEIFPSW PMRHQQQLHS 120 GNSQSVGSTT DSSSAQNTMS QMELVSPASS APRQEVMMVT TDDYSYKPGL AAAPAAAAAP 180 PPSFQQHHPL PLQLHGGDGG GGGGDHDKRK HGSTRKDGKL VDAKTERRLA QNREAARKSR 240 LRKKAYVQQL ETSRIRLQQV EHELQRARSQ GLFVGGCSAA GDMSSGAAMF DMEYARWLDD 300 DSKRLAELRA GLQAQLLDGN LGLIVEECMQ HYDELFQLKA ALARSDVFHL LTGAWATAAE 360 RCFFWMGGFR PSELLKILIP QLDPLTEQQL LGICNLQQSS EQAEEALAQG LHQLHQSLAD 420 TVATGTLNDG AATPNYMNIM AVAIDKLACL ENFYQQADNL RQQTLHQMRR ILTTRQAARC 480 FLSIGEYYSR LRALSNLWAS RPRDNFIGTE SLSPTATELQ ALHHQQQNQF TGF*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Expression in meristem/developing ligule regions. {ECO:0000269|PubMed:9490265}. |
Functional Description ? help
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Source |
Description |
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |