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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G337900.1.p |
Common Name | Sb03g038210, SORBIDRAFT_03g038210 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 278aa MW: 29636.8 Da PI: 6.3397 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G337900.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 70.4 | 2.5e-22 | 116 | 174 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59
Dg+ WrKYGqK+++g ++pr YYrC+++ gC+++++v++++++p + ei Y g+H+++
Sobic.003G337900.1.p 116 DGFIWRKYGQKDINGHKHPRLYYRCAHKdqGCNATRRVQQTQDQPAAYEIAYYGDHTCK 174
9**************************9999**************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MTLDTPAAVV LELMTMGQQS AAHLRDLLRA SSPAASSPHQ ELAAEILRCC GRVIDALRAT 60 TNGRKRKAAA AEYHQDAAAT GGATWSPPPP PPGPPLKRRA RGAEATREVT SGTTVDGFIW 120 RKYGQKDING HKHPRLYYRC AHKDQGCNAT RRVQQTQDQP AAYEIAYYGD HTCKGAATAW 180 QQLGAAPAVV DFGSNSWGSA DANNNGGSPA ASMSQGGWSP SASSEVGFDF EALHEWHDTA 240 APDPVMEFLD GCFGWESVLQ DSSDFGGLLL HDIATFQ*
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