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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G329500.1.p |
Common Name | Sb03g037560, SORBIDRAFT_03g037560 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 469aa MW: 51130.4 Da PI: 6.8727 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G329500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 29.6 | 1.5e-09 | 183 | 223 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka+i++Le +L++ ++L
Sobic.003G329500.1.p 183 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 223
7889************************9777777666555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009410 | Biological Process | response to xenobiotic stimulus |
GO:0009627 | Biological Process | systemic acquired resistance |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 469 aa
Download sequence Send
to blast |
MESRRGGSTA AAEDAGGGMP SFGPPQHAIH TDVNSMQPSR VTDFGALAQS AGFRIEDLAN 60 LNANALFNLK PNTHTINNSP LQFGSYGKPI SPHINTIEAA TAKTRIDPQL LEQQTGAQSN 120 LVALPTGNIE NWGESAMAGG SPMTDTSSDP DTDERNQMFE QGLVTVPTAS DSSDKSRDKL 180 DQKTLRRLAQ NREAARKSRL RKKAYIQNLE SSRLKLTQLE QELQRARQQG IFISTSGDQP 240 QSTSGNGALA FDMEYARWLE EHNKHVNELR AAVNAHAGDN DLRGIVDSIM AHYDEIFRLK 300 GVAAKADVFH VLSGMWKTPA ERCFMWLGGF RSSELLKLLA GHLEPLTDQQ LVGISNLQQS 360 SQQAEDALSQ GMEALQQSLA ETLASGSLGP AGPSGNVANY MGQMAMAMGK LGTLENFLRQ 420 ADNLRLQTLQ QMQRILTTRQ SARALLAISD YFSRLRALSS LWLARPRE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT066069 | 0.0 | BT066069.1 Zea mays full-length cDNA clone ZM_BFb0225O03 mRNA, complete cds. |