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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G324400.2.p |
Common Name | 37, AP, AP37, Sb03g037080, SORBIDRAFT_03g037080 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ERF |
Protein Properties |
Length: 243aa MW: 24932.3 Da PI: 9.3711 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G324400.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.3 | 1.2e-20 | 32 | 83 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++y+GVr ++ +gr++AeIrdp k+ r++lg+++taeeAaka++aa+++++g+
Sobic.003G324400.2.p 32 PHYRGVRKRP-WGRFAAEIRDPA---KKSRVWLGTYDTAEEAAKAYDAAAREFRGA 83
68********.**********83...36*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 243 aa
Download sequence Send
to blast |
MAPRVADKSP LPPATGLGLG VGGVVGGVGM GPHYRGVRKR PWGRFAAEIR DPAKKSRVWL 60 GTYDTAEEAA KAYDAAAREF RGAKAKTNFP FPSQCAVAAG GAGSPCSNST VDSSGGASGC 120 AVQAPMQAMP LPPALDLDLF HRAAAVNAVT AGGMRFPFKG YPVARPTPHQ YFFYEQAAAA 180 AAAAAGYRML KVAPPPVTVA AVAQSDSDSS SVVDHTPSPP AVTAKKEVGF ELDLNWPPPA 240 EN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JF714972 | 0.0 | JF714972.1 Sorghum bicolor AP 37 protein (AP 37) mRNA, complete cds. |