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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.003G285500.1.p |
Common Name | Sb03g033640, SORBIDRAFT_03g033640 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 320aa MW: 32239.6 Da PI: 5.0455 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G285500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 91.2 | 8.1e-29 | 94 | 152 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs+fpr+YYrC+s+ gCp++k+vers+ +p+ v++tY+ eH h+
Sobic.003G285500.1.p 94 TDSWAWRKYGQKPIKGSPFPRAYYRCSSSkGCPARKQVERSRAEPDKVIVTYSFEHSHS 152
69*************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 320 aa
Download sequence Send
to blast |
MDAEWSDGAA AASPPTVSGG ESKPGAAGAV SSSADCPGSP PVSPAPPSTT SPAAAAAAAG 60 SGRRRSANKR VVTVPLADVS GPRPKGVGEG NTPTDSWAWR KYGQKPIKGS PFPRAYYRCS 120 SSKGCPARKQ VERSRAEPDK VIVTYSFEHS HSDAVARAQQ NRQQASKPKA VQRQPVPPEP 180 AAESPSSGSY DVAAATVCGA GAPAAAAAGT EVGGAASVEV RDEFRWLYDG VSVTSSASPS 240 DVEAADEMLY GAMFFGAAAA PPAAPLPDEF VGDVGGLFDY GEGGGEEDAM FAGLGELPEC 300 AMVFRRHAGD GLSVAGGVK*
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