|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.003G242800.2.p |
Common Name | Sb03g029920, SORBIDRAFT_03g029920 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
|
Family |
WRKY |
Protein Properties |
Length: 347aa MW: 35974.1 Da PI: 6.9225 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G242800.2.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 82.3 | 4.8e-26 | 143 | 204 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg +WrKYGqK++ g+++prsY+rCt++ +C++ k+v+r++ dp +++++Y+g H++
Sobic.003G242800.2.p 143 LDDGLSWRKYGQKDILGAKYPRSYFRCTHRhtqSCQASKQVQRTDGDPLLFDVVYHGAHTCA 204
58***************************98999**************************96 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 347 aa
Download sequence Send
to blast |
MEGGVPEEKC ALVAELVQVL EMARQLETHM AVVVQQQQQG GGGAGGGADQ RYRALVSTMR 60 ASIDRAVHMA VSCCAEGRPG TGQLPESPPS GGDGSSPRSG GSDHAGELRG RGNAAAGQCK 120 KRKTLPKWST QVRVSAVQDV SPLDDGLSWR KYGQKDILGA KYPRSYFRCT HRHTQSCQAS 180 KQVQRTDGDP LLFDVVYHGA HTCAQGAAAH PSNQQPAVQE QTTSPSPGFE AGTAVLPFSL 240 RPASNKPTTG ADAAATSSRF VTTGCVSVTA SPFLSPATPE SQLVSSSSSG YAVGGGGGVA 300 MAGVRNVPDV ELASTTNSPM AMGEMDFMFP LDAADFLELG NPASYF*
|