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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.003G163401.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
ERF |
Protein Properties |
Length: 186aa MW: 20177.4 Da PI: 11.2561 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G163401.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 23.9 | 1e-07 | 48 | 89 | 12 | 56 |
AP2 12 rgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56
+g W+ eIr+p + r ++gkf eAa a++aa+ +++ge
Sobic.003G163401.1.p 48 WGGWAMEIRVP-----HtrLRLWIGKFRHSLEAALAYDAAMFCFYGE 89
99********7.....335************************9986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 186 aa
Download sequence Send
to blast |
MAASGTLTST VALAEARQQQ RSGCPATGST TSIRRDRQKA LGWAGVLWGG WAMEIRVPHT 60 RLRLWIGKFR HSLEAALAYD AAMFCFYGEH LPRPRRFNFL GMWHPTIPKH LRIHLTIPTI 120 RAIAADHGRS CAAFLAPLLC RAAPRGLSTQ PLMAMVPGSG TDGPGTTADS HLQLTLLSAT 180 NDHTM*
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