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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.003G050500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 177aa MW: 18650.3 Da PI: 10.178 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G050500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 41.2 | 3.6e-13 | 61 | 106 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
+r rr+++NRe+ArrsR+RK+ ++ eL++ +++Le N++L+ ++e
Sobic.003G050500.1.p 61 RRFRRRISNRESARRSRARKQRYLYELRDSAAVLERGNRDLAARAE 106
688**************************************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 177 aa
Download sequence Send
to blast |
MAFSGCMTCI DMQISPAMAK QHVGFGPDHT AGGPFPTQPA AASWPGVDAG AAAAECVDHQ 60 RRFRRRISNR ESARRSRARK QRYLYELRDS AAVLERGNRD LAARAEAARG RLALALLANA 120 ALRAEAAALS RRLAAARRDL VLLGRLYAGA VAAGGVDGEC CLGSTDTEQM VASLIA*
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