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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.003G049400.1.p |
Common Name | Sb03g004290, SORBIDRAFT_03g004290 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 197aa MW: 20655.6 Da PI: 10.6977 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.003G049400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 39.2 | 1.5e-12 | 104 | 164 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
ke r +r+ +NR++A+ R+RKka++ eLe k+k Le N +L +++++l++e +l++
Sobic.003G049400.1.p 104 KEQNRLKRLLRNRVSAQQARERKKAYLTELEAKAKDLEVRNAELEQRVSTLQNENNTLRQI 164
78899***************************************************99986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 197 aa
Download sequence Send
to blast |
MAAQEQEHEK QQAKTSTTSS LPSSSERSSS SAPNNLREGG AESDEEIRRV PEMGGASASA 60 SSGAGADERP KEDGGKQGGQ LAAAAGAQPP AAAGKKRGRT AGDKEQNRLK RLLRNRVSAQ 120 QARERKKAYL TELEAKAKDL EVRNAELEQR VSTLQNENNT LRQILKNTTA HASKRSSGGG 180 GGKGGDGGKK HHFAKS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU976642 | 0.0 | EU976642.1 Zea mays clone 986002 transcription factor HY5 mRNA, complete cds. |