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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sobic.002G418500.1.p |
Common Name | Sb02g043030, SORBIDRAFT_02g043030 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 355aa MW: 37058.3 Da PI: 9.0594 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.002G418500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 78.8 | 6.1e-25 | 125 | 186 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg +WrKYGqK +++s++prsYYrCt++ +C+++++v+ s+ +p+ ++i Y g+H+++
Sobic.002G418500.1.p 125 LDDGKAWRKYGQKRIHESPNPRSYYRCTHRpeqRCMATRQVQASDANPSEFIISYYGQHTCQ 186
58***************************99999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 355 aa
Download sequence Send
to blast |
MASSAGGGGR RSPPATAAPR MVMDRLMEVH EGATKLQTML QESPTPSIAA AAGTTSELRL 60 TIDRMLSSLS SAMSAWNTTG AAQGPGQGRR RRRGEAAAGS GPQRRSSTRR RSHSPFVKMV 120 TTSKLDDGKA WRKYGQKRIH ESPNPRSYYR CTHRPEQRCM ATRQVQASDA NPSEFIISYY 180 GQHTCQDPST IPLVIPDTAP PPDCANLISF GGCTTIAAGA SSSSTTTTAV PPQQALSFDP 240 TTTPMLMLSR FGYSSSLPAA QAQQDYRCGS EEVLSSRSSP AAQLATMVVG SAGTMASSST 300 VGSAPAEYWP GGTSGMACGP GSFPSSPSSL GFMTGSPFGS FGNAGDDDLF GFDP*
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