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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.002G280800.1.p |
Common Name | Sb02g031340, SORBIDRAFT_02g031340 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 216aa MW: 22590.4 Da PI: 9.162 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.002G280800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 58.4 | 1.5e-18 | 143 | 195 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
+++r +r++kNRe+A rsR+RK+a++ eLe+kv+ L+ eN++L+ + ++l+
Sobic.002G280800.1.p 143 SDRRKKRMIKNRESAARSRARKQAYVRELERKVQMLQDENESLRVKYDQLRVS 195
689*******************************************9999865 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:2000028 | Biological Process | regulation of photoperiodism, flowering |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MAAIDMEDDD DIWANTASSP SASPPQPVAA ASTCSAFIST QLSLNSRLHL LSSAAAAGGS 60 SPTTRGVGAG AYAADGVRHH MSLGVGGGFR NAVASPASSF FPYNLDSAAA DVAPLDAGPA 120 RGLLEDEMCL GAGAAATWAG GGSDRRKKRM IKNRESAARS RARKQAYVRE LERKVQMLQD 180 ENESLRVKYD QLRVSVEVAV PIVRKTLQRM PSAPF*
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