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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.002G235500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
bZIP |
Protein Properties |
Length: 187aa MW: 20793.2 Da PI: 9.3176 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.002G235500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 37.3 | 5.9e-12 | 87 | 140 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
+ +r rr+ +NRe+ArrsR RK+ ++ eL v L + N++L +el++ +
Sobic.002G235500.1.p 87 AERRRRRMVSNRESARRSRMRKQRQLTELWAQVVHLRGANRRLLDELNRAMRGC 140
568999*****************************************9987666 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MLQQHHYHGG VASLHCLSNP DQAFHAHYHS NMIAMPPTPL FHHLSPSTFE QPIHEAQAVV 60 AAGNSPAGSG STDDAYGGGG RTAMAEAERR RRRMVSNRES ARRSRMRKQR QLTELWAQVV 120 HLRGANRRLL DELNRAMRGC SDVCCENARL EKEKTDLSTK LERLTQAQNT ATPSSSSEPQ 180 HDTARY*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 101 | 108 | RRSRMRKQ |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727709 | 1e-157 | KJ727709.1 Zea mays clone pUT5648 bZIP transcription factor (bZIP82) gene, partial cds. |