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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sobic.001G084000.1.p |
Common Name | Sb01g007570, SORBIDRAFT_01g007570 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Family |
WRKY |
Protein Properties |
Length: 332aa MW: 34373.8 Da PI: 6.6787 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sobic.001G084000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 104.1 | 7.8e-33 | 147 | 204 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp+vv++tYeg+H h+
Sobic.001G084000.1.p 147 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSTDPSVVITTYEGQHCHH 204
8******************************************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MAGAAGDRSE DVGADWPFGG GAADAFTEYS SVFAELGWPG GLLASGELPV LDLPDPAAPL 60 PSSSQLLSIE PSEDPAPARS GDAGASSSSS GDGDGAAPGN DDDDRKAAPA AEAAGRKPAA 120 ATAKKGQKRP RQPRFAFMTK SEIDHLEDGY RWRKYGQKAV KNSPFPRSYY RCTNSKCTVK 180 KRVERSSTDP SVVITTYEGQ HCHHIGPFQR GGGGGGGGAA TARYHSAAAV ALAEQMSSSS 240 SFIPARQLYS LPPLHPPQSS LSSEAVVSSA ATTSFHQHVN DGDELRQASY SSRVSMAQSP 300 STPSSVPPAI SVEKAGLLDD MVPHGVRHGT P*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU665447 | 0.0 | EU665447.1 Triticum aestivum WRKY23 transcription factor mRNA, partial cds. |