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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sobic.001G078900.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
|
| Family |
G2-like |
| Protein Properties |
Length: 278aa MW: 29395.3 Da PI: 6.0522 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sobic.001G078900.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 88.5 | 6.4e-28 | 214 | 264 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
k+r++W+peLH++Fv a++qLGG+++AtPk+i+e+m+v+gLt+++vkSHLQ
Sobic.001G078900.2.p 214 KARRCWSPELHRQFVAALHQLGGPQVATPKQIREVMQVDGLTNDEVKSHLQ 264
68************************************************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MGLDVGEIGM GLDLGLDLRL FAARTAGGMA AAAAKGAPAG IESCIRSLEE ERKKIEVFRR 60
ELPLCARLLA DVIDELKEEA AKRGGGDADA KADDGDKRKW MSTAQLWVDS EAKSDESDKE 120
HQSEITSPEP KLLGGAPMPI RAVAAVPPLP PPFFRREDSS AGTCLSLVSP ASKAPISPVA 180
TSDNASGRFC PTMPPSGSSG VTLHSQAQQQ ASRKARRCWS PELHRQFVAA LHQLGGPQVA 240
TPKQIREVMQ VDGLTNDEVK SHLQVSNDPL CPGISSS*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ728055 | 0.0 | KJ728055.1 Zea mays clone pUT6201 G2-like transcription factor (GLK44) mRNA, partial cds. |
