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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_20188.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
bZIP |
Protein Properties |
Length: 364aa MW: 39990.6 Da PI: 8.4578 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_20188.1_g00001.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 36 | 1.5e-11 | 286 | 332 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
+r +r++kNRe+A rsR RK+a++ eLe +v++L++ ++L+k+ e
Sme2.5_20188.1_g00001.1 286 RRRKRMIKNRESAARSRDRKQAYTLELEAEVAKLKEIKQDLQKKQAE 332
689**************************************876433 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MGSYLNFKNF ADTSLPESSG NNSNFSLARQ SSIYSFTFDE LQSTCGLGKD FGSMNMDDLL 60 RNIEESQALP SSAAGGENLQ RQGSLTLPRT LSQKTVDEVW KDFQKESVNA NDACETGGSN 120 FGQRESTLGE MTLEEFLVRA GAVREDIQPT GYSNDVVFTS GFTQPSSSVT IAFQQATQNP 180 GRQIAGNNTF NVVSTTSSSQ QPLFPKQTTV EFASPMQLGS PGTRGPMSNP SANINSVMQG 240 GLMSMPVKGG SPGNLDTSSL SPSPYACSEG GRGRRSCSSF EKVVERRRKR MIKNRESAAR 300 SRDRKQAYTL ELEAEVAKLK EIKQDLQKKQ AEFVEKQKNQ LLEKMNMPWE NKLICLRRTV 360 TGPW
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Functional Description ? help
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Source |
Description |
UniProt | Binds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Up-regulated by abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AB675692 | 0.0 | AB675692.1 Solanum lycopersicum SlABF4 mRNA for ABA responsive transcription factor, complete cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT1G49720.1 | 4e-74 | abscisic acid responsive element-binding factor 1 |