PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sme2.5_20188.1_g00001.1
Organism
Solanum melongena
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family bZIP
Protein Properties Length: 364aa    MW: 39990.6 Da    PI: 8.4578
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sme2.5_20188.1_g00001.1genomeEGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1361.5e-11286332551
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                              +r +r++kNRe+A rsR RK+a++ eLe +v++L++  ++L+k+  e
  Sme2.5_20188.1_g00001.1 286 RRRKRMIKNRESAARSRDRKQAYTLELEAEVAKLKEIKQDLQKKQAE 332
                              689**************************************876433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-11282347IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-12283341No hitNo description
PROSITE profilePS5021710.082284336IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.6E-9286334No hitNo description
CDDcd147071.47E-21286340No hitNo description
PfamPF001707.8E-10286344IPR004827Basic-leucine zipper domain
PROSITE patternPS000360289304IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MGSYLNFKNF ADTSLPESSG NNSNFSLARQ SSIYSFTFDE LQSTCGLGKD FGSMNMDDLL  60
RNIEESQALP SSAAGGENLQ RQGSLTLPRT LSQKTVDEVW KDFQKESVNA NDACETGGSN  120
FGQRESTLGE MTLEEFLVRA GAVREDIQPT GYSNDVVFTS GFTQPSSSVT IAFQQATQNP  180
GRQIAGNNTF NVVSTTSSSQ QPLFPKQTTV EFASPMQLGS PGTRGPMSNP SANINSVMQG  240
GLMSMPVKGG SPGNLDTSSL SPSPYACSEG GRGRRSCSSF EKVVERRRKR MIKNRESAAR  300
SRDRKQAYTL ELEAEVAKLK EIKQDLQKKQ AEFVEKQKNQ LLEKMNMPWE NKLICLRRTV  360
TGPW
Functional Description ? help Back to Top
Source Description
UniProtBinds to the ABA-responsive element (ABRE). Could participate in abscisic acid-regulated gene expression.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by abscisic acid (ABA) and cold. {ECO:0000269|PubMed:10636868}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB6756920.0AB675692.1 Solanum lycopersicum SlABF4 mRNA for ABA responsive transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015058945.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7
RefseqXP_015058946.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7
RefseqXP_027768835.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 7
SwissprotQ9M7Q51e-85AI5L4_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBLM1C3P70.0M1C3P7_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000590400.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA7762497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49720.14e-74abscisic acid responsive element-binding factor 1
Publications ? help Back to Top
  1. Fernando VCD,Al Khateeb W,Belmonte MF,Schroeder DF
    Role of Arabidopsis ABF1/3/4 during det1 germination in salt and osmotic stress conditions.
    Plant Mol. Biol., 2018. 97(1-2): p. 149-163
    [PMID:29680877]