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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_17021.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
M-type_MADS |
Protein Properties |
Length: 213aa MW: 24325.1 Da PI: 8.9901 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_17021.1_g00001.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 48.8 | 8.8e-16 | 6 | 45 | 3 | 42 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
ien+ r+v++ kR +g+l KA EL +LCdae+ ii+s+
Sme2.5_17021.1_g00001.1 6 IENENERKVSYKKREKGLLTKADELGILCDAEITAIIYSP 45
9*************************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MKFALIENEN ERKVSYKKRE KGLLTKADEL GILCDAEITA IIYSPYKNEP TVFPNHGSAV 60 NTLTKFKELP ADYRSKTMVI RDGFTMKRIQ KLNEKLIKVR KENRVKENTN AMYEVLKEKY 120 IPTDMHPCDV NDLCYVIKKN LKQVREAMKK KIGEEGYTST FPQSIVGPMV PSGTKIEGPN 180 DPLLSHTGLE LSMIPPSSPL TFFSGINYER DED
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