 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_16526.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
BES1 |
| Protein Properties |
Length: 159aa MW: 17197.5 Da PI: 10.0914 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_16526.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 214.9 | 1.9e-66 | 9 | 153 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssa 86
g+sgr ptwkErEnnkrRERrRRaiaaki++GLR qGn+klpk++DnneVlkALc eAGwvvedDGttyrkg++p+ + +s
Sme2.5_16526.1_g00002.1 9 GSSGRLPTWKERENNKRRERRRRAIAAKIFTGLRTQGNFKLPKHCDNNEVLKALCFEAGWVVEDDGTTYRKGQRPP-PIVNGCASM 93
689*************************************************************************.88999999* PP
DUF822 87 saspesslqsslkssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvsss 149
++s +ss+q s+ ss+++spv+sy+asp+sssfpsps+ d ++ +++lp+l++l++++s+
Sme2.5_16526.1_g00002.1 94 NISACSSIQPSPMSSSFPSPVPSYHASPTSSSFPSPSHCDGNPP---SHILPFLHNLASIPST 153
****************************************9987...599****999998876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 159 aa
Download sequence Send
to blast |
MTACAGGGGS SGRLPTWKER ENNKRRERRR RAIAAKIFTG LRTQGNFKLP KHCDNNEVLK 60
ALCFEAGWVV EDDGTTYRKG QRPPPIVNGC ASMNISACSS IQPSPMSSSF PSPVPSYHAS 120
PTSSSFPSPS HCDGNPPSHI LPFLHNLASI PSTLPPLRI
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 1e-25 | 13 | 85 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 1e-25 | 13 | 85 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 1e-25 | 13 | 85 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 1e-25 | 13 | 85 | 372 | 444 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT013592 | 0.0 | BT013592.1 Lycopersicon esculentum clone 132355R, mRNA sequence. |
