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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_15542.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
bHLH |
Protein Properties |
Length: 240aa MW: 28191.6 Da PI: 5.439 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_15542.1_g00001.1 | genome | EGD | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 37.5 | 4.3e-12 | 152 | 195 | 6 | 54 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L
Sme2.5_15542.1_g00001.1 152 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYVKEL 195
589*********************66......****************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MELTQQDFFE AESWNNTTFA NAWNIESPTF YQENPESNSS LLGLMMSPSQ SNYFPCHDFQ 60 ESSYPFLDSF TAPLQLIHSS TYNNSIIEER TMVEEGQIGH FTNDFHGHYE DSISCYNNIK 120 MEQVANSRIV GEKKSRSNYK VKKLEGQPSK NLMAERRRRK RLNDRLSMLR SIVPKISKMD 180 RTSILGDTID YVKELLDKIN RLREENEMED EIKDLNFMGN FKELKPYEGF VRNPPKWQLP
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 154 | 161 | ERRRRKRL |