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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_13377.1_g00001.1 |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
C2H2 |
| Protein Properties |
Length: 221aa MW: 24717.3 Da PI: 7.6961 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_13377.1_g00001.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.8 | 1.9e-05 | 25 | 47 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C ++F+++ L H+++H
Sme2.5_13377.1_g00001.1 25 FRCNTCREVFTSSQGLAGHQQKH 47
89*******************99 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MQQQPPTKEP VHQGIKPNFE GLWCFRCNTC REVFTSSQGL AGHQQKHKSE GTWIKGAHHE 60
KFFCPIADLP SFDHQLGECK STPTTFPGQE GFYHPCQRNP MVQGPCRPPK CPQSILNQAQ 120
QAMMFQGPRV VAPSPVSGQQ GFYRPHPINP MVQGPRRLPV CPRSILNQSQ QAMVLQGPCV 180
VAPAPITPLP EDLNILDTRL NQILGITNND DQEELDLELR L
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