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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_11773.1_g00001.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
WRKY |
Protein Properties |
Length: 360aa MW: 40993 Da PI: 6.3898 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_11773.1_g00001.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 74.9 | 1e-23 | 187 | 248 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+dDg++WrKYGqK++ s++pr+Y+rCt++ +C++ k+v++ +++p+++ +tY g+H+++
Sme2.5_11773.1_g00001.1 187 VDDGHAWRKYGQKQILHSTYPRHYFRCTHKydqKCQASKQVQKIQDNPQLFRTTYYGHHTCK 248
59***************************99999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway |
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway |
GO:0010200 | Biological Process | response to chitin |
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:1900056 | Biological Process | negative regulation of leaf senescence |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
IRCNRMGLEV ILNWEIALTR KRDVGSLTPH VHVMYRRHGQ VESSGVMLCN DHRLGRDNLF 60 TDEEISSAFP VIAHLVLLML VKDIDMENSS SDLNRAIAGL IRGREFTQQL KEIIKKPRGE 120 VANVMAEGLV AKIMDSFSET LSVINNSDEA KSPEDYSSAS CKSSDRRGCY KRRKTSESNI 180 KETSDLVDDG HAWRKYGQKQ ILHSTYPRHY FRCTHKYDQK CQASKQVQKI QDNPQLFRTT 240 YYGHHTCKAF PRVSQIILDS PLDGNPNYIS FDQNPTTFPS IKQEEVFSFY PKIEDQIQSS 300 SSDYLLPNDH DHLTFEASCG HMQSPDVMSS GVSTTTTTSN DNLEIGIDFE ECLWNFEGCS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU056918 | 1e-169 | EU056918.1 Solanum tuberosum WRKY transcription factor 6 mRNA, complete cds. |