|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_09968.1_g00004.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
Family |
C3H |
Protein Properties |
Length: 242aa MW: 26564.3 Da PI: 4.2881 |
Description |
C3H family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_09968.1_g00004.1 | genome | EGD | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-CCCH | 18.3 | 4.1e-06 | 54 | 74 | 6 | 27 |
-SGGGGTS--TTTTT-SS-SSS CS
zf-CCCH 6 CrffartGtCkyGdrCkFaHgp 27
C f++ +G+C+ G+rC+F Hgp
Sme2.5_09968.1_g00004.1 54 CFFYF-NGYCNKGERCSFLHGP 74
44455.5*************96 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MDDEWIKSFT DCVYFLAFPL TCKKPLESHP ENSSELAPLP NKSAVPVYKT DIPCFFYFNG 60 YCNKGERCSF LHGPDDGTAA GKSTEVAYGV PDDPTAEKKT SSGSETGPPG VKKHPDSSEM 120 GPKAAAQEHI ESNMGLHLMA TDVGEQSASH ETSGSPSEEP TAVRLDSLLP AEGLTQGGYY 180 MSPYQSSDKE MEDNVEREEW LESSPGFDVI VGDRVEGLTH EDERNYCWKF GSLLEAYNMK 240 LP
|