 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_08985.1_g00003.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
FAR1 |
| Protein Properties |
Length: 104aa MW: 12243.1 Da PI: 8.9399 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_08985.1_g00003.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 59.8 | 8.6e-19 | 33 | 103 | 1 | 74 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdg 74
kfY +YA++ GFsvrk++ ++s+++++i+ ++fvCskeg++++++ + ++++r et+ gCk ++ ++k++++
Sme2.5_08985.1_g00003.1 33 KFYLDYAHRNGFSVRKNRISRSRKDKSIIGQEFVCSKEGFHSKKSLE---SNKQRDETKEGCKVMICLSKKEEE 103
6*****************************************99877...8999**************999765 PP
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC238909 | 3e-99 | AC238909.6 Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-131f15 map 1, complete sequence. |
| GenBank | AC245726 | 3e-99 | AC245726.3 Solanum lycopersicum strain Heinz 1706 chromosome 10 clone slm-44p6 map 10, complete sequence. |
| GenBank | AC246156 | 3e-99 | AC246156.5 Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-18l8 map 1, complete sequence. |
| GenBank | AC246211 | 3e-99 | AC246211.4 Solanum lycopersicum strain Heinz 1706 chromosome 1 clone hba-41e4 map 1, complete sequence. |
| GenBank | HG975513 | 3e-99 | HG975513.1 Solanum lycopersicum chromosome ch01, complete genome. |
