 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_08558.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
G2-like |
| Protein Properties |
Length: 295aa MW: 33405.4 Da PI: 9.4576 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_08558.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.9 | 2e-32 | 58 | 111 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
rlrWtp+LH+rFv+ave+LGG+++AtPk il+lm++kgL ++hvkSHLQ+YR+
Sme2.5_08558.1_g00002.1 58 VRLRWTPDLHRRFVQAVERLGGPDRATPKLILQLMNIKGLNIAHVKSHLQMYRS 111
59***************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MMEDDGDTQF SPNSGKNEEE DENTSTKLPK DGGSSSNSTI EEGVKNYTVR PYVRSKMVRL 60
RWTPDLHRRF VQAVERLGGP DRATPKLILQ LMNIKGLNIA HVKSHLQMYR SKKIDDPAQG 120
STNHHKLFME SGDPYIFNLS QLPMLSSFNQ RFNSTFRYGD VSSRNFQDDK LMHSSIMGQS 180
TIDKARTTLY TTLNERIFGS NHIDKLTPLF QMAEKSQARR LSPLKRKAMH CDLNLSLGVK 240
QKNNSHGDDD EDDDDGSTLT LSLSSQRSPS RLKEDANYAT IKNARRGTST LDLTL
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 4e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 4e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 4e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 4e-18 | 59 | 113 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975449 | 1e-140 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |
