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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_08356.1_g00003.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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| Family |
LBD |
| Protein Properties |
Length: 240aa MW: 25197.4 Da PI: 4.6034 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_08356.1_g00003.1 | genome | EGD | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 126.5 | 1.2e-39 | 96 | 195 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+CaaCk+l++ C+++Cvla +fp ++ kf vh++FG+sn++kll++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q
Sme2.5_08356.1_g00003.1 96 SCAACKFLGKICTENCVLATCFPPDDLIKFTTVHRVFGTSNIIKLLQELPESQRADAVSSMVYEANARLRDPVYGCLGSICHLQKQ 181
6************************************************************************************* PP
DUF260 87 leqlkaelallkee 100
+ l+a+la++++e
Sme2.5_08356.1_g00003.1 182 IGDLQAQLAKAQAE 195
**********9987 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MEYSLCSEMG IIATSSLSSS SSSSGSPSSS SSSSPSSNYP LSPPAEVTSS PPSSSAVSSS 60
SSSPNSPPTD LPTEATSLPS SSRAVLAPVT VVVIRSCAAC KFLGKICTEN CVLATCFPPD 120
DLIKFTTVHR VFGTSNIIKL LQELPESQRA DAVSSMVYEA NARLRDPVYG CLGSICHLQK 180
QIGDLQAQLA KAQAEIINME CQHANLMALI CMDMSQSPQP ISSPQQSLDS FANNSLSFME
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