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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_08356.1_g00003.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
LBD |
Protein Properties |
Length: 240aa MW: 25197.4 Da PI: 4.6034 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_08356.1_g00003.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 126.5 | 1.2e-39 | 96 | 195 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqq 86
+CaaCk+l++ C+++Cvla +fp ++ kf vh++FG+sn++kll++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q
Sme2.5_08356.1_g00003.1 96 SCAACKFLGKICTENCVLATCFPPDDLIKFTTVHRVFGTSNIIKLLQELPESQRADAVSSMVYEANARLRDPVYGCLGSICHLQKQ 181
6************************************************************************************* PP
DUF260 87 leqlkaelallkee 100
+ l+a+la++++e
Sme2.5_08356.1_g00003.1 182 IGDLQAQLAKAQAE 195
**********9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MEYSLCSEMG IIATSSLSSS SSSSGSPSSS SSSSPSSNYP LSPPAEVTSS PPSSSAVSSS 60 SSSPNSPPTD LPTEATSLPS SSRAVLAPVT VVVIRSCAAC KFLGKICTEN CVLATCFPPD 120 DLIKFTTVHR VFGTSNIIKL LQELPESQRA DAVSSMVYEA NARLRDPVYG CLGSICHLQK 180 QIGDLQAQLA KAQAEIINME CQHANLMALI CMDMSQSPQP ISSPQQSLDS FANNSLSFME
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