 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sme2.5_08138.1_g00002.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
BES1 |
| Protein Properties |
Length: 181aa MW: 20844.7 Da PI: 7.9863 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_08138.1_g00002.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 122.5 | 5.8e-38 | 36 | 108 | 4 | 76 |
DUF822 4 grkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl 76
r p+ +Er +nk+RE +RR ia ki+aGLRa+Gnyklpk+aD n+ l ALc+eAGw ve+DGt yrk ++
Sme2.5_08138.1_g00002.1 36 FRYPSDRERQKNKQREQKRRSIAHKIFAGLRAHGNYKLPKHADTNDLLMALCKEAGWYVEEDGTIYRKDLVKM 108
5899***************************************************************988777 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 181 aa
Download sequence Send
to blast |
MVKDKKISGV RGCIKTSRGP WLVHRTAKDG SVMTRFRYPS DRERQKNKQR EQKRRSIAHK 60
IFAGLRAHGN YKLPKHADTN DLLMALCKEA GWYVEEDGTI YRKDLVKMSR LIDVDSAYVS 120
MDDQTKEGDY CKCEDQIKYG EHYCECEVNM NNVEDEKGRP EESLTPSAEV CDVNLTLTLS 180
C
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 6e-15 | 37 | 103 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 6e-15 | 37 | 103 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 6e-15 | 37 | 103 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 6e-15 | 37 | 103 | 372 | 438 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975449 | 1e-103 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |
