PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Sme2.5_07976.1_g00003.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

G2-like

Protein Properties

Length: 435aa MW: 49033.2 Da PI: 8.334

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_07976.1_g00003.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	21.6	4.9e-07	174	192	4	22
G2-like 4 lrWtpeLHerFveaveqLG 22 + Wt++LH++F+ea+eqLG Sme2.5_07976.1_g00003.1 174 IIWTNDLHAKFIEALEQLG 192 68****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	7.1E-5	170	197	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence Send to blast
MLMSAGRLCP RLGLRLVGVM QAEDRPGSLI LRLICDRDFG NFNFLALRCG WRVPGGAIIL 60 GWRYVVPGPL MLCLICVGDL KPSGIVYDLN FEIVCDEYNE LLAMNALKNG AHLCVKRPCG 120 EMIMEESRKV EKDVVSNENY KLKRKKGRKG GKEINEGEGQ SSVINKTVTH KNYIIWTNDL 180 HAKFIEALEQ LGEGSDMDLS CLMTYVEQLE GKSLEKEGVV RSKGLNLRVI GCNKAPRGDD 240 GMTHLRCPKC GRNHDGTYWR DISACFGCGE MGHKILDYPY AQNKGKGGDI DQRGAPRHNW 300 FYALQRKQRG DEMLNDITGC DPVWQEKGLN LRFVGPHRVL RSIAKVFYEL ELPMGTNRVH 360 LFIHVSMLRG YVGDPNAIEL FEVVGVVVNE LTYEEVPVEM LCKHVIRLRI IGVASIKVLW 420 GINKLKVLFV EPERA

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence Send to blast

MLMSAGRLCP RLGLRLVGVM QAEDRPGSLI LRLICDRDFG NFNFLALRCG WRVPGGAIIL  60
GWRYVVPGPL MLCLICVGDL KPSGIVYDLN FEIVCDEYNE LLAMNALKNG AHLCVKRPCG  120
EMIMEESRKV EKDVVSNENY KLKRKKGRKG GKEINEGEGQ SSVINKTVTH KNYIIWTNDL  180
HAKFIEALEQ LGEGSDMDLS CLMTYVEQLE GKSLEKEGVV RSKGLNLRVI GCNKAPRGDD  240
GMTHLRCPKC GRNHDGTYWR DISACFGCGE MGHKILDYPY AQNKGKGGDI DQRGAPRHNW  300
FYALQRKQRG DEMLNDITGC DPVWQEKGLN LRFVGPHRVL RSIAKVFYEL ELPMGTNRVH  360
LFIHVSMLRG YVGDPNAIEL FEVVGVVVNE LTYEEVPVEM LCKHVIRLRI IGVASIKVLW  420
GINKLKVLFV EPERA

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1	2	7