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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_07876.1_g00002.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
WOX |
Protein Properties |
Length: 360aa MW: 40574.4 Da PI: 9.6294 |
Description |
WOX family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_07876.1_g00002.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 54.8 | 1.6e-17 | 49 | 109 | 2 | 57 |
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++R+++ +eq+++Le+ F++ +p ++e++++ +kl ++ +++V++WFqNr+ + k+
Sme2.5_07876.1_g00002.1 49 KPRWNPRPEQIRILEAIFNSgMVNPPRDEIRKIRAKLqeygQVGDANVFYWFQNRKSRSKH 109
89*****************99*************************************995 PP
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2 | Wus_type_Homeobox | 111.9 | 3.5e-36 | 48 | 111 | 2 | 65 |
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
+++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++kq
Sme2.5_07876.1_g00002.1 48 PKPRWNPRPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHKQ 111
689***********************************************************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 360 aa
Download sequence Send
to blast |
MASSNRHWPS MFKSKPCNSH HHQWQHDINS SLIQQRPPCN PEERSPEPKP RWNPRPEQIR 60 ILEAIFNSGM VNPPRDEIRK IRAKLQEYGQ VGDANVFYWF QNRKSRSKHK QRHLQAKSQQ 120 QQNNSSSSSS SDKSSPNSLT FSIGSSNVMD LLNSPTSSVN QQNYDEFLSN EQPFFFTVQP 180 PPAPIAQTHD HSAMTQGFCF PDSTTFSQSS SALFPSEWMG ISQAPNISKK VENEKMNLQS 240 QLMSYTVTST VSPPATTSTI PAISNIQGVA VDPIDVGPTR STVFINDVAF EVGSGPFNVR 300 EVFGEDAVLI HSSGEPLITN EWGLTIQPLQ HDLEELMLKK KWVANSSLLS LKKKRKTRRR
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 338 | 355 | KKKWVANSSLLSLKKKRK |