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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sme2.5_07790.1_g00004.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
NAC |
Protein Properties |
Length: 282aa MW: 32713.3 Da PI: 9.1804 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_07790.1_g00004.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 42.1 | 2.7e-13 | 7 | 117 | 12 | 128 |
NAM 12 eelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdk.kyatgkrknratksgyWkatgkdkevlsk 95
e+ + yL + v g ++++ + i+ vd+y + +P++L ++++++ y F++ +k k+++g++ nr g+W + +++v++k
Sme2.5_07790.1_g00004.1 7 EQQLLGYLLRFVPGMPVQC-DQIRFVDLYGIkKPSKLL-DTTTTNHYHYVFTQLKKiKAENGNNFNRRFVGGTWTGKAATRSVYNK 90
555559*************.88*******9878****7.44444556677777666155689*****999**************** PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+++++g k+ + f + + W m ey+l
Sme2.5_07790.1_g00004.1 91 ERSEIGFKRAFRFD----E--NTLAWYMTEYHL 117
*************7....2..3578******98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MAMKIDEQQL LGYLLRFVPG MPVQCDQIRF VDLYGIKKPS KLLDTTTTNH YHYVFTQLKK 60 IKAENGNNFN RRFVGGTWTG KAATRSVYNK ERSEIGFKRA FRFDENTLAW YMTEYHLSDK 120 ILEHLRLRGQ IRYEEFVVCY IRCNVNLDHN RENFLANSSP NSSSQCQETM KSFAQENQDL 180 GESSAANVTH PANLLANESN VAAIKEEEES SARPDYDIAA YYKNLMPMLP LYSKQWFLTF 240 RNYKKMRMKS HFSAKIFILV IQICGVKSVP SNFSDYAPSS HI
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975514 | 7e-56 | HG975514.1 Solanum lycopersicum chromosome ch02, complete genome. |