 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sme2.5_07251.1_g00004.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
|
| Family |
SRS |
| Protein Properties |
Length: 326aa MW: 35258.9 Da PI: 8.0241 |
| Description |
SRS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sme2.5_07251.1_g00004.1 | genome | EGD | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF702 | 218 | 2e-67 | 107 | 254 | 3 | 154 |
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalss 88
g++sCqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerqqqlaa++++++ +++++++kr+re+ ++s+l s
Sme2.5_07251.1_g00004.1 107 GGGISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLAALQQQQQGQNNNNKQKRQRED--PSASSLVS 190
5789*********************************************************999999999999987..78899999 PP
DUF702 89 tklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
+l+s+++ le+ ++P++v+++avf+c+++ss++d+e++laYq+a sigGhvfkGiLydqG e+
Sme2.5_07251.1_g00004.1 191 PRLPSNTTG--LEVGKFPAKVRTSAVFQCIQMSSIEDNEDQLAYQAAASIGGHVFKGILYDQGHES 254
999999755..89999***********************************************987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MANFFSLGGG RSSSPAVPTE ISQENNWFLY RNDHHTQEIS NTYKGFELWQ SGNTPQQQQF 60
RHPIYPLQDL YSTDVGLGVG PSRTAFDIST GDDEASRSGL VMMKSAGGGI SCQDCGNQAK 120
KDCQHMRCRT CCKSRGFQCQ THVKSTWVPA AKRRERQQQL AALQQQQQGQ NNNNKQKRQR 180
EDPSASSLVS PRLPSNTTGL EVGKFPAKVR TSAVFQCIQM SSIEDNEDQL AYQAAASIGG 240
HVFKGILYDQ GHESQYNNMG GGDTSSGGSA GVQHHHNSAA IATPTAASGD ATAAGPSNFL 300
DPSLFPASLS TFMVAGTQFF PPSRSP
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371, PubMed:24142382). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371, PubMed:24142382). Acts synergistically with MYC1 in the transactivation of TPS5 (PubMed:24884371). {ECO:0000269|PubMed:24142382, ECO:0000269|PubMed:24884371}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KC331910 | 0.0 | KC331910.1 Solanum lycopersicum expression of terpenoids 1 mRNA, complete cds. |
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G51060.1 | 8e-62 | Lateral root primordium (LRP) protein-related |
