PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Sme2.5_07094.1_g00005.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

G2-like

Protein Properties

Length: 374aa MW: 42102.7 Da PI: 8.0783

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_07094.1_g00005.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	21.2	6.4e-07	234	255	1	22
G2-like 1 kprlrWtpeLHerFveaveqLG 22 k r Wt +LH++F++a+e+LG Sme2.5_07094.1_g00005.1 234 KSRTLWTDDLHAKFMKALEHLG 255 67999****************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	2.6E-5	233	258	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence Send to blast
MYKYIFRGWL DTAGSARAMG RLRLDGVEVR LGLRFVGENF WCDAVVWHEY GGHHHFRPLI 60 LTSPDVQARG PLAQDLHCGL TSSPTSELLL VYYVTTLIFQ ILFVLAVCNE YNEQHSVMKS 120 LNIGTYIVVE QPLDEKIVDD LWQFVLRKKI KKEKAVEGLE ENEVEKNVDD NGNNNIIGNT 180 EEQDGKKNNV PKIEEQSNNI HEVENVVVSN EKCKQRTKRG MENITIVNEN IGKKSRTLWT 240 DDLHAKFMKA LEHLGEGKNF GNHGRASYYK VAGCKPSADI PSRKAPADRR GRPAAVGRVR 300 QGRGATIACD QPEPEIIPPT AGSVTPPVLE AHRQEAGSSQ VARRDSFRAR DFLACRPPEF 360 FGSKPSKDPQ EFVR

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence Send to blast

MYKYIFRGWL DTAGSARAMG RLRLDGVEVR LGLRFVGENF WCDAVVWHEY GGHHHFRPLI  60
LTSPDVQARG PLAQDLHCGL TSSPTSELLL VYYVTTLIFQ ILFVLAVCNE YNEQHSVMKS  120
LNIGTYIVVE QPLDEKIVDD LWQFVLRKKI KKEKAVEGLE ENEVEKNVDD NGNNNIIGNT  180
EEQDGKKNNV PKIEEQSNNI HEVENVVVSN EKCKQRTKRG MENITIVNEN IGKKSRTLWT  240
DDLHAKFMKA LEHLGEGKNF GNHGRASYYK VAGCKPSADI PSRKAPADRR GRPAAVGRVR  300
QGRGATIACD QPEPEIIPPT AGSVTPPVLE AHRQEAGSSQ VARRDSFRAR DFLACRPPEF  360
FGSKPSKDPQ EFVR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	293	DRRGRPA

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA813	23	84